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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Rice-Synthetic_map1
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 8
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
Marker Oryza
QTL
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
Automated name-based
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
(Hide Advanced Menu)

Map Details

Map Type: Physical [ View Map Type Info ]
Map Set Name: Rice - Synthetic_map1 [ View Map Set Info ]
Map Name: 8
Map Start: 0 bp
Map Stop: 28,439,308 bp
Features by Type:
212 Marker Oryza
166 QTL
378 Total

Map Features

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Items 1 to 25 of 378.       of 16 | Next
Rice - Synthetic_map1 - 8
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
S2108 Marker Oryza 4,948,825 - 4,950,988 No other positions
R662 Marker Oryza 27,830,412 - 27,831,422 No other positions
AMY3D Marker Oryza 21,646,965 - 21,647,445 No other positions
RM337 Marker Oryza 152,299 - 152,485 No other positions
E18M43_4 Marker Oryza 13,927,893 - 19,052,586 No other positions
RZ617 Marker Oryza 13,927,893 - 13,930,426 No other positions
P122 Marker Oryza 5,372,364 - 5,373,710 No other positions
RM149 Marker Oryza 24,721,368 - 24,721,598 No other positions
C277 Marker Oryza 1,719,421 - 1,720,193 No other positions
RM502 Marker Oryza 26,492,216 - 26,492,387 No other positions
G1149 Marker Oryza 26,355,407 - 26,355,674 No other positions
S12419 Marker Oryza 3,520,678 - 3,521,523 No other positions
R2118 Marker Oryza 25,907,505 - 25,907,952 No other positions
S2387S Marker Oryza 3,543,352 - 3,543,641 No other positions
RG1 Marker Oryza 21,646,965 - 21,647,445 No other positions
BCD98 Marker Oryza 27,823,012 - 27,823,408 No other positions
RM342 Marker Oryza 19,957,367 - 19,957,791 No other positions
E2209S Marker Oryza 28,182,124 - 28,182,538 No other positions
RZ66 Marker Oryza 25,590,576 - 25,590,676 No other positions
PC32M7 Marker Oryza 20,662,388 - 20,662,645 No other positions
R2367 Marker Oryza 2,309,086 - 2,309,646 No other positions
RM152 Marker Oryza 682,990 - 683,186 No other positions
C390 Marker Oryza 1,586,759 - 1,587,907 No other positions
RM531 Marker Oryza 22,469,338 - 22,469,465 No other positions
G2132 Marker Oryza 19,052,416 - 19,052,586 No other positions